Stem-loop fve-MIR482c

Accession

MI0036421

Description

Fragaria vesca fve-MIR482c precursor miRNA

Sequence

125939 reads, 13304.0 reads per million, 18 experiments

gguAGACUUGUGAGGAAGUUGUAGUUGGgaugggaggcuagggaagaaauuacuggaaacucauccuaauuUCUUUCCUAUUCCUCCCAUCCCuccucaauuucccaagguuucucc
((.((((((.((.((((((((.((..(((((((((((.((((((((((((((..(((......)))))))))))))))))..)))))))))))..))))))))))))))))))..))

Structure

  -u      G  A        U  UU           -c              cu   aa 
gg  AGACUU UG GGAAGUUG AG  GGgaugggagg  uagggaagaaauua  gga  c
||  |||||| || |||||||| ||  |||||||||||  ||||||||||||||  |||   
cc  uuugga ac ccuuuaac uc  CCCUACCCUCC  AUCCUUUCUuuaau  ccu  u
  uc      -  -        -  cu           UU              --   ac 

Annotation confidence Medium

Genome context

LG5: 13604726-13604842 [-]

Mature fve-miR482c-5p

• Accession: MIMAT0060550
• Description: Fragaria vesca fve-miR482c-5p mature miRNA
• Sequence: 4 - AGACUUGUGAGGAAGUUGUAGUUGG - 28
• Evidence: experimental ; unknown

Mature fve-miR482c-3p

• Accession: MIMAT0044559
• Description: Fragaria vesca fve-miR482c-3p mature miRNA
• Sequence: 72 - UCUUUCCUAUUCCUCCCAUCCC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610