Stem-loop fve-MIR11303

Accession

MI0036447

Description

Fragaria vesca fve-MIR11303 precursor miRNA

Sequence

2047 reads, 215.0 reads per million, 18 experiments

ggugggggagcugaacUCAAACAUCACUGCAGCUGUAugcucuuagcuaaauaauugauuaaucaacagccgcagaCUGCUGUAGUGAUGUUUAGAGUucagcucccggucc
((...((((((((((((((((((((((((((((.((.(((.....(((......((((....)))).))).))).)).))))))))))))))).)))))))))))))...))

Structure

  ugg             -               U  A   ucuua   aaauaa    u 
gg   gggagcugaacUC AAACAUCACUGCAGC GU ugc     gcu      uuga u
||   ||||||||||||| ||||||||||||||| || |||     |||      ||||  
cc   cccucgacuUGAG UUUGUAGUGAUGUCG Ca acg     cga      aacu a
  ugg             A               U  g   ----c   -----c    a 

Annotation confidence Medium

Genome context

LG2: 20569546-20569657 [+]

Mature fve-miR11303-5p

• Accession: MIMAT0044586
• Description: Fragaria vesca fve-miR11303-5p mature miRNA
• Sequence: 17 - UCAAACAUCACUGCAGCUGUA - 37
• Evidence: experimental ; Illumina [1]

Mature fve-miR11303-3p

• Accession: MIMAT0060572
• Description: Fragaria vesca fve-miR11303-3p mature miRNA
• Sequence: 77 - CUGCUGUAGUGAUGUUUAGAGU - 98
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610