Accession
MI0036403
Description
Fragaria vesca
fve-MIR3627b precursor miRNA
Sequence
15386
reads,
2276.0
reads per million, 18 experiments
auccugUCGCAGGAGAGAUGGCACUACCuagcuuuacgcauacguaacgagauauauacguacgugguaaauauauauagaugaguuauugaugguguagcagcuagcUUGUGCCAUCCUCCUGUGAc
.....((((((((((.((((((((...((((((((((((....(((((...(((((((..(((...)))..)))))))......))))).....)))))).))))))...))))))))))))))))))
.....((((((((((.((((((((...((((((((((((....(((((...(((((((..(((...)))..)))))))......))))).....)))))).))))))...))))))))))))))))))
Structure
auccu A UAC - -auac ---gag cg g
gUCGCAGGAG GAUGGCAC Cuagcu uuacgc guaac auauaua uac
|||||||||| |||||||| |||||| |||||| ||||| ||||||| ||| u
cAGUGUCCUC CUACCGUG gaucga gaugug uauug uauauau aug
----- - UUc c guagu aguaga aa g
Annotation confidence
High
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Genome context
LG6: 1813136-1813263 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fve-MIR3627b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fve-miR3627b-5p
| Accession | MIMAT0044538 |
| Description | Fragaria vesca fve-miR3627b-5p mature miRNA |
| Sequence | 7 - UCGCAGGAGAGAUGGCACUACC - 28 |
| Evidence |
experimental
Illumina [1] |
Mature fve-miR3627b-3p
| Accession | MIMAT0060535 |
| Description | Fragaria vesca fve-miR3627b-3p mature miRNA |
| Sequence | 109 - UUGUGCCAUCCUCCUGUGA - 127 |
| Evidence |
experimental
unknown |
References
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