Stem-loop fve-MIR11309

Accession

MI0036453

Description

Fragaria vesca fve-MIR11309 precursor miRNA

Sequence

gcacuacaaucaagaugUUUGUUUGGCAUGCAGUUGGCacuugguaacuaggguuaacauuuaaauaaaaauuaaauuugggagaaagaacuauaaucaggaugucuuaagcacgauuaauuuguuaggaaaguaaauaaacucgagccaugcagccaagugccaauugcaugcugaacgaacaucuugauuguggaugc
(((((((((((((((((((((((((((((((((((((((((((((......((((...((((((.......)))))).(((.........)))...........(((((...((((.....))))))))).(((......)))..)))).....)))))))))))))))))))))))))))))))))))))))))).)))

Structure

   -                                          aacuag    aacauuuaaauaaaaauuaaauuugggagaaagaacuauaaucaggaug     agc    u 
gca cuacaaucaagaugUUUGUUUGGCAUGCAGUUGGCacuuggu      gguu                                                 ucuua   acga u
||| ||||||||||||||||||||||||||||||||||||||||||      ||||                                                 |||||   |||| a
cgu gguguuaguucuacaagcaagucguacguuaaccgugaaccg      ccga                                                 aggau   uguu a
   a                                          -acgua    ----------------------------------gcucaaauaaaugaa     ---    u 

Annotation confidence Not enough data

Genome context

LG0: 4870673-4870872 [+]

Mature fve-miR11309

• Accession: MIMAT0044592
• Description: Fragaria vesca fve-miR11309 mature miRNA
• Sequence: 18 - UUUGUUUGGCAUGCAGUUGGC - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610