Accession
MI0036409
Description
Fragaria vesca
fve-MIR396b precursor miRNA
Sequence
952407
reads,
75434.0
reads per million, 18 experiments
aaguccuggucaugcuuUUCCACAGCUUUCUUGAACUucaauucucugcuaacaaucuguaaucucuugcaagaguauuagcacaauguuugggaGCUCAAGAAAGCUGUGGGACAAcaugacaacccaggauuu
((((((((((((((...(((((((((((((((((.(((((((....((((((...(((((((....)))).)))...))))))....)))..)))).)))))))))))))))))...)))))....)))))))))
((((((((((((((...(((((((((((((((((.(((((((....((((((...(((((((....)))).)))...))))))....)))..)))).)))))))))))))))))...)))))....)))))))))
Structure
---- cuu A -- ucuc caa - u
aaguccugg ucaug UUCCACAGCUUUCUUGA CUuc aau ugcuaa ucu guaa c
||||||||| ||||| ||||||||||||||||| |||| ||| |||||| ||| ||||
uuuaggacc aguac AGGGUGUCGAAAGAACU Gagg uug acgauu aga cguu u
caac AAC C gu uaac aug a c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
LG1: 2526777-2526911 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from fve-MIR396b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fve-miR396b-5p
| Accession | MIMAT0044544 |
| Description | Fragaria vesca fve-miR396b-5p mature miRNA |
| Sequence | 18 - UUCCACAGCUUUCUUGAACU - 37 |
| Evidence |
experimental
Illumina [1] |
Mature fve-miR396b-3p
| Accession | MIMAT0044545 |
| Description | Fragaria vesca fve-miR396b-3p mature miRNA |
| Sequence | 96 - GCUCAAGAAAGCUGUGGGACAA - 117 |
| Evidence |
experimental
Illumina [1] |
References
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