Accession
MI0036380
Description
Fragaria vesca
fve-MIR169a precursor miRNA
Sequence
363
reads,
38.0
reads per million, 13 experiments
caugaagaaaugagucuaguuugaUAGCCAAGGAUGACUUGCCUGccuccuaaaacagguuuauaugaguuacagauuaaaaccuggucggguucucaGGCAGUCACCUUGGCUAACUugacaagcucuuuucucucaug
((((((((((.(((.((.(((.(.(((((((((.(((((.(((((...(((....(((((((...(((........))))))))))...)))....))))))))))))))))))).)..))).))))).))))).)))))
((((((((((.(((.((.(((.(.(((((((((.(((((.(((((...(((....(((((((...(((........))))))))))...)))....))))))))))))))))))).)..))).))))).))))).)))))
Structure
- u u a -u a A U -ccu aaaa aua guu
cauga agaaa gag cu guu g UAGCCAAGG UGACU GCCUG ccu cagguuu uga a
||||| ||||| ||| || ||| | ||||||||| ||||| ||||| ||| ||||||| |||
guacu ucuuu cuc ga cag C AUCGGUUCC ACUGA CGGac ggg guccaaa auu c
c u - a uU A - - ucuu -cug --- aga
Annotation confidence
High
Do you think this miRNA is real?
Genome context
LG3: 8877628-8877767 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from fve-MIR169a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fve-miR169a-5p
| Accession | MIMAT0044512 |
| Description | Fragaria vesca fve-miR169a-5p mature miRNA |
| Sequence | 25 - UAGCCAAGGAUGACUUGCCUG - 45 |
| Evidence |
experimental
Illumina [1] |
Mature fve-miR169a-3p
| Accession | MIMAT0060518 |
| Description | Fragaria vesca fve-miR169a-3p mature miRNA |
| Sequence | 99 - GGCAGUCACCUUGGCUAACU - 118 |
| Evidence |
experimental
unknown |
References
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