Stem-loop fve-MIR171a

Accession

MI0036386

Description

Fragaria vesca fve-MIR171a precursor miRNA

Sequence

7866 reads, 780.0 reads per million, 18 experiments

ggaucgguauaacgggaUAUUGGUCCGGUUCAAUAAGAAaacagcgcucgaugugagcuugagcucuauuuuuUGAUUGAGCCGUGCCAAUAUCacgugccacugcucc
(((.((((...(((.(((((((((.(((((((((.((((((.((.((((((.......)))))).)).)))))).))))))))).))))))))).)))...)))).)))

Structure

   u    aua   g         C         A      c  c      ug 
gga cggu   acg gaUAUUGGU CGGUUCAAU AGAAaa ag gcucga  u
||| ||||   ||| ||||||||| ||||||||| |||||| || ||||||  g
ccu guca   ugc CUAUAACCG GCCGAGUUA Uuuuuu uc cgaguu  a
   c    ccg   a         U         G      a  u      cg 

Annotation confidence High

Genome context

LG6: 34450103-34450211 [-]

Mature fve-miR171a-5p

• Accession: MIMAT0060523
• Description: Fragaria vesca fve-miR171a-5p mature miRNA
• Sequence: 18 - UAUUGGUCCGGUUCAAUAAGAA - 39
• Evidence: experimental ; unknown

Mature fve-miR171a-3p

• Accession: MIMAT0044518
• Description: Fragaria vesca fve-miR171a-3p mature miRNA
• Sequence: 74 - UGAUUGAGCCGUGCCAAUAUC - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610