Stem-loop fve-MIR11306

Accession

MI0036450

Description

Fragaria vesca fve-MIR11306 precursor miRNA

Sequence

377 reads, 35.0 reads per million, 18 experiments

ucagaauucaguuuuccuagUCUUCCUCGAAGUUCUUCGGUAgcauucaaauauagaauaaaauguaaguuuauucuacccuacuaaauuuucaggcuacuuuuugaaugCUACCGAAGAACUUUGCAAAAGacuaggaaaacugaaaucgga
...((.((((((((((((((((((...((((((((((((((((((((((((..(((((((((.......))))))))).(((...........)))......))))))))))))))))))))))))...)))))))))))))))))).))...

Structure

uca  a                  CCU                        ----------------------ua         au 
   ga uucaguuuuccuagUCUU   CGAAGUUCUUCGGUAgcauucaaa                        uagaauaaa  g
   || ||||||||||||||||||   ||||||||||||||||||||||||                        |||||||||  u
   cu aagucaaaaggaucaGAA   GUUUCAAGAAGCCAUCguaaguuu                        aucuuauuu  a
agg  a                  AAC                        uucaucggacuuuuaaaucauccc         ga 

Annotation confidence Not enough data

Genome context

LG4: 14285793-14285945 [+]

Mature fve-miR11306-5p

• Accession: MIMAT0060574
• Description: Fragaria vesca fve-miR11306-5p mature miRNA
• Sequence: 21 - UCUUCCUCGAAGUUCUUCGGUA - 42
• Evidence: experimental ; unknown

Mature fve-miR11306-3p

• Accession: MIMAT0044589
• Description: Fragaria vesca fve-miR11306-3p mature miRNA
• Sequence: 111 - CUACCGAAGAACUUUGCAAAAG - 132
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610