Stem-loop fve-MIR482d

Accession

MI0036422

Description

Fragaria vesca fve-MIR482d precursor miRNA

Sequence

27251 reads, 2504.0 reads per million, 18 experiments

gaaaggUAGAUAGAUCCCAAGGAAGUUUUGggguauagguggguaggauagagaucaaagacuuguucuuucccugaacaguuucucUUCCCUAUUCCACCUAUUCCCCaugagauccuuugguuccucccuuuc
((((((.((...((.((.(((((..((.(((((.(((((((((((((..(((((.....((((.((((.......)))))))))))))..)))).))))))))).))))).))..))))).)).)))).))))))

Structure

      U  AUA  U  C     AG  U     u         -    au     ucaaa    u    uu 
gaaagg AG   GA CC AAGGA  UU UGggg auagguggg uagg  agaga     gacu guuc  u
|||||| ||   || || |||||  || ||||| ||||||||| ||||  |||||     |||| ||||  c
cuuucc uc   cu gg uuccu  ag aCCCC UAUCCACCU AUCC  Ucucu     uuga caag  c
      c  ---  u  u     ag  u     U         U    CU     -----    -    uc 

Annotation confidence Medium

Genome context

LG4: 24750963-24751097 [-]

Mature fve-miR482d-5p

• Accession: MIMAT0060551
• Description: Fragaria vesca fve-miR482d-5p mature miRNA
• Sequence: 7 - UAGAUAGAUCCCAAGGAAGUUUUG - 30
• Evidence: experimental ; unknown

Mature fve-miR482d-3p

• Accession: MIMAT0044560
• Description: Fragaria vesca fve-miR482d-3p mature miRNA
• Sequence: 88 - UUCCCUAUUCCACCUAUUCCCC - 109
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610