Stem-loop fve-MIR11298

Accession

MI0036442

Description

Fragaria vesca fve-MIR11298 precursor miRNA

Sequence

89081 reads, 9331.0 reads per million, 18 experiments

caucucugcaaaauuucagccAAUUUGGUGAUCGUUAAGuuccucaaacucgaguuuuucugguaugaacacaaccagacagaauucaauccguccauuuguuuuucgaguUUGAGGGGCUUAACGAUUACCaaauuaggugaaauuuuucagagaug
((((((((.(((((((((.(.(((((((((((((((((((((((((((((((((((((((((((.((....)))))))).)))))....................)))))))))))))))))))))))))))))))).).))))))))).))))))))

Structure

        c         g c                                --------------------     -      a  a 
caucucug aaaauuuca c AAUUUGGUGAUCGUUAAGuuccucaaacucga                    guuuu ucuggu ug a
|||||||| ||||||||| | ||||||||||||||||||||||||||||||||                    ||||| |||||| ||  
guagagac uuuuaaagu g uuaaaCCAUUAGCAAUUCGGGGAGUUugagcu                    uaaga agacca ac c
        u         g a                                uuuuguuuaccugccuaacu     c      -  a 

Annotation confidence Low

Genome context

LG6: 15969655-15969812 [-]

Mature fve-miR11298-5p

• Accession: MIMAT0060568
• Description: Fragaria vesca fve-miR11298-5p mature miRNA
• Sequence: 22 - AAUUUGGUGAUCGUUAAG - 39
• Evidence: experimental ; unknown

Mature fve-miR11298-3p

• Accession: MIMAT0044581
• Description: Fragaria vesca fve-miR11298-3p mature miRNA
• Sequence: 112 - UUGAGGGGCUUAACGAUUACC - 132
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610