Stem-loop fve-MIR2111a

Accession

MI0036399

Description

Fragaria vesca fve-MIR2111a precursor miRNA

Sequence

ucauugauauuggguaaggaucgggUAAUCUGCAUCCUGAGGUUUagagaucaauuacucuguguuguuucuagcucucagguugcagauuaccucgugcucaccgcaaugcaaga
...(((.((((((((.((.((.((((((((((((.(((((((.(((((((.((((........))))))))))).))))))).)))))))))))).)).)).))).))))))))..

Structure

uca   a     -   a  g  c            U       U       u    uac 
   uug uauug ggu ag au gggUAAUCUGCA CCUGAGG UUagaga caau   u
   ||| ||||| ||| || || |||||||||||| ||||||| ||||||| ||||    
   aac guaac cca uc ug uccauuagacgu ggacucu gaucuuu guug   c
-ag   -     g   c  g  c            u       c       -    ugu 

Annotation confidence Not enough data

Genome context

LG3: 8387953-8388068 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fve-MIR2111a

Mature fve-miR2111a

• Accession: MIMAT0044533
• Description: Fragaria vesca fve-miR2111a mature miRNA
• Sequence: 26 - UAAUCUGCAUCCUGAGGUUU - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610