Accession
MI0036399
Description
Fragaria vesca
fve-MIR2111a precursor miRNA
Sequence
402
reads,
41.0
reads per million, 18 experiments
ucauugauauuggguaaggaucgggUAAUCUGCAUCCUGAGGUUUagagaucaauuacucuguguuguuucuaGCUCUCAGGUUGCAGAUUACCucgugcucaccgcaaugcaaga
...(((.((((((((.((.((.((((((((((((.(((((((.(((((((.((((........))))))))))).))))))).)))))))))))).)).)).))).))))))))..
...(((.((((((((.((.((.((((((((((((.(((((((.(((((((.((((........))))))))))).))))))).)))))))))))).)).)).))).))))))))..
Structure
uca a - a g c U U u uac uug uauug ggu ag au gggUAAUCUGCA CCUGAGG UUagaga caau u ||| ||||| ||| || || |||||||||||| ||||||| ||||||| |||| aac guaac cca uc ug uCCAUUAGACGU GGACUCU Gaucuuu guug c -ag - g c g c U C - ugu
Annotation confidence
High
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Genome context
LG3: 8387953-8388068 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fve-MIR2111a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fve-miR2111a-5p
| Accession | MIMAT0044533 |
| Description | Fragaria vesca fve-miR2111a-5p mature miRNA |
| Sequence | 26 - UAAUCUGCAUCCUGAGGUUU - 45 |
| Evidence |
experimental
Illumina [1] |
Mature fve-miR2111a-3p
| Accession | MIMAT0060533 |
| Description | Fragaria vesca fve-miR2111a-3p mature miRNA |
| Sequence | 74 - GCUCUCAGGUUGCAGAUUACC - 94 |
| Evidence |
experimental
unknown |
References
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