Stem-loop fve-MIR167d

Accession

MI0036375

Description

Fragaria vesca fve-MIR167d precursor miRNA

Sequence

140562 reads, 14265.0 reads per million, 18 experiments

uucguguacaagucauaguUGAAGCUGCCAGCAUGAUCUCAaccucucucagauuucugagggaagcucAGAUCAUGUGGUAGUUUCACCuguuguuuguagcaugaa
.(((((((((((.(((((.(((((((((((.((((((((...(.((((((((....)))))))).)...))))))))))))))))))).))).))))))).)))))).

Structure

u      -     u  -   u           G        CAa c        a 
 ucgugu acaag ca uag UGAAGCUGCCA CAUGAUCU   c ucucucag u
 |||||| ||||| || ||| ||||||||||| ||||||||   | ||||||||  
 aguacg uguuu gu guC ACUUUGAUGGU GUACUAGA   g agggaguc u
a      a     -  u   C           -        cuc a        u 

Annotation confidence Medium

Genome context

LG4: 815457-815564 [+]

Mature fve-miR167d-5p

• Accession: MIMAT0044506
• Description: Fragaria vesca fve-miR167d-5p mature miRNA
• Sequence: 20 - UGAAGCUGCCAGCAUGAUCUCA - 41
• Evidence: experimental ; Illumina [1]

Mature fve-miR167d-3p

• Accession: MIMAT0060515
• Description: Fragaria vesca fve-miR167d-3p mature miRNA
• Sequence: 70 - AGAUCAUGUGGUAGUUUCACC - 90
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610