Stem-loop fve-MIR156d

Accession

MI0036354

Description

Fragaria vesca fve-MIR156d precursor miRNA

Sequence

54053 reads, 6035.0 reads per million, 18 experiments

ggaggUGACAGAAGAGAGUGAGCACacacgguguuuucuugccugcuguguuucaugcuugaagcuuugcguGCUCACUCUCUAUCUGUCACCcc
((.((((((((((((((((((((((....((((......)))).((...((((((....))))))...))))))))))))))).)))))))))))

Structure

  a         -             acacgguguuuucuugccu  ugu      u 
gg ggUGACAGA AGAGAGUGAGCAC                   gc   guuuca g
|| ||||||||| |||||||||||||                   ||   ||||||  
cc CCACUGUCU UCUCUCACUCGug                   cg   cgaagu c
  -         A             -------------------  uuu      u 

Annotation confidence High

Genome context

LG2: 18533979-18534073 [+]

Mature fve-miR156d-5p

• Accession: MIMAT0044480
• Description: Fragaria vesca fve-miR156d-5p mature miRNA
• Sequence: 6 - UGACAGAAGAGAGUGAGCAC - 25
• Evidence: experimental ; Illumina [1]

Mature fve-miR156d-3p

• Accession: MIMAT0060499
• Description: Fragaria vesca fve-miR156d-3p mature miRNA
• Sequence: 73 - GCUCACUCUCUAUCUGUCACC - 93
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610