Stem-loop fve-MIR156c

Accession

MI0036352

Description

Fragaria vesca fve-MIR156c precursor miRNA

Sequence

ugUUGACAGAAGAGAGUGAGCACaaccccucauuggcgaaagagagcuuugucacuguugggagugugcucacucuucuucugucagca
((((((((((((((((((((((((..(((.((.(((((((.......))))))).))..)))..))))))))))).)))))))))))))

Structure

             -           ac   -u  u       ag 
ugUUGACAGAAGA GAGUGAGCACa  ccc  ca uggcgaa  a
||||||||||||| |||||||||||  |||  || |||||||  g
acgacugucuucu cucacucgugu  ggg  gu acuguuu  a
             u           ga   uu  c       cg 

Annotation confidence Not enough data

Genome context

LG3: 5985819-5985907 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fve-MIR156c

Mature fve-miR156c

• Accession: MIMAT0044478
• Description: Fragaria vesca fve-miR156c mature miRNA
• Sequence: 3 - UUGACAGAAGAGAGUGAGCAC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610