Stem-loop fve-MIR11288e

Accession

MI0036462

Description

Fragaria vesca fve-MIR11288e precursor miRNA

Sequence

95207 reads, 9252.0 reads per million, 18 experiments

ggucuucuaucagcgauuCGUCAGAUUCCAAUUCAAACUgaguagucggauggucgacuguaaagaguuUGAAGUGGGAUUUGGCGAAUUgagggucaagauu
.(((((..(((..(((((((((((((((((.((((((((...(((((((....))))))).....)))))))).)))))))))))))))))..))).))))).

Structure

g     cu   ag                 A        --gag       a 
 gucuu  auc  cgauuCGUCAGAUUCCA UUCAAACU     uagucgg u
 |||||  |||  ||||||||||||||||| ||||||||     |||||||  
 uagaa  ugg  gUUAAGCGGUUUAGGGU AAGUuuga     gucagcu g
u     -c   ga                 G        gaaau       g 

Annotation confidence High

Genome context

LG3: 25359226-25359328 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from fve-MIR11288e

Mature fve-miR11288e-5p

• Accession: MIMAT0060585
• Description: Fragaria vesca fve-miR11288e-5p mature miRNA
• Sequence: 19 - CGUCAGAUUCCAAUUCAAACU - 39
• Evidence: experimental ; unknown

Mature fve-miR11288e-3p

• Accession: MIMAT0044601
• Description: Fragaria vesca fve-miR11288e-3p mature miRNA
• Sequence: 70 - UGAAGUGGGAUUUGGCGAAUU - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610