Stem-loop fve-MIR11315

Accession

MI0036463

Description

Fragaria vesca fve-MIR11315 precursor miRNA

Sequence

17807 reads, 1526.0 reads per million, 18 experiments

ucaaggucuugugaugaagacuCUAGUCAUUGGUCAUAGCAUCauauccgaacuugaagaaaauucuuaagUUUGGUUUUGAUGCUAUGAcaaaugacuaaaaagcuucguacucuugauauuga
((((.(((..(.(((((((.((.((((((((.((((((((((((...((((((((((.((....))))))))))))...)))))))))))).))))))))...)))))))).).)..))).))))

Structure

    g   uu u -      a  --C        G            uau          a  a 
ucaa guc  g g augaag cu   UAGUCAUU GUCAUAGCAUCa   ccgaacuuga ga a
|||| |||  | | |||||| ||   |||||||| ||||||||||||   |||||||||| ||  
aguu uag  c c ugcuuc ga   aucaguaa cAGUAUCGUAGU   GGUUUgaauu cu a
    a   uu u a      -  aaa        a            UUU          -  u 

Annotation confidence Medium

Genome context

LG5: 14533821-14533945 [-]

Mature fve-miR11315-5p

• Accession: MIMAT0044602
• Description: Fragaria vesca fve-miR11315-5p mature miRNA
• Sequence: 23 - CUAGUCAUUGGUCAUAGCAUC - 43
• Evidence: experimental ; Illumina [1]

Mature fve-miR11315-3p

• Accession: MIMAT0060586
• Description: Fragaria vesca fve-miR11315-3p mature miRNA
• Sequence: 72 - UUUGGUUUUGAUGCUAUGA - 90
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610