Accession
MI0036460
Description
Fragaria vesca
fve-MIR11288b precursor miRNA
Sequence
10267
reads,
1373.0
reads per million, 18 experiments
ucggugacgucuuccgcauCAAAAUUGGCCACCUCCCAAUuaaaacuuagaguuugagaugcucaaauccuaguuugaacUGGGAUUGGGCGAAUUUUGGUcgagauuga
........((((..((.(((((((((.(((...(((((....(((((.((.(((((((...))))))).)))))))....)))))...))).)))))))))))))))...
........((((..((.(((((((((.(((...(((((....(((((.((.(((((((...))))))).)))))))....)))))...))).)))))))))))))))...
Structure
ucggugac uc c G ACC AUua u a a
gucu cg auCAAAAUU GCC UCCCA aaacu ag guuugag
|||| || ||||||||| ||| ||||| ||||| || ||||||| u
uaga gc UGGUUUUAA CGG AGGGU uuuga uc uaaacuc
-----agu -- - G GUU caag - c g
Annotation confidence
High
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Genome context
LG3: 25352641-25352750 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from fve-MIR11288b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fve-miR11288b-5p
| Accession | MIMAT0060583 |
| Description | Fragaria vesca fve-miR11288b-5p mature miRNA |
| Sequence | 20 - CAAAAUUGGCCACCUCCCAAU - 40 |
| Evidence |
experimental
unknown |
Mature fve-miR11288b-3p
| Accession | MIMAT0044599 |
| Description | Fragaria vesca fve-miR11288b-3p mature miRNA |
| Sequence | 81 - UGGGAUUGGGCGAAUUUUGGU - 101 |
| Evidence |
experimental
Illumina [1] |
References
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