Stem-loop fve-MIR11310

Accession

MI0036454

Description

Fragaria vesca fve-MIR11310 precursor miRNA

Sequence

433 reads, 46.0 reads per million, 18 experiments

cUGUGGGCAGCACUGGAGUGGUcuucccuuucucaaauggccaucuguucugauuaaagaucuaugucuaauuugauaagugagaaAGGGAUCACAACUCCAGUGCUgccuacag
(((((((((((((((((((.((..(((((((((((.........((..((.((((..((((....)))))))).))..)))))))))))))..)).)))))))))))))))))))

Structure

                   G  cu           aauggccau  gu  u    aa    c 
cUGUGGGCAGCACUGGAGU GU  ucccuuucuca         cu  uc gauu  agau u
||||||||||||||||||| ||  |||||||||||         ||  || ||||  ||||  
gacauccgUCGUGACCUCA CA  AGGGAaagagu         ga  ag uuaa  ucug a
                   A  CU           ---------  au  u    --    u 

Annotation confidence Low

Genome context

LG0: 8842577-8842691 [-]

Mature fve-miR11310-5p

• Accession: MIMAT0060578
• Description: Fragaria vesca fve-miR11310-5p mature miRNA
• Sequence: 2 - UGUGGGCAGCACUGGAGUGGU - 22
• Evidence: experimental ; unknown

Mature fve-miR11310-3p

• Accession: MIMAT0044593
• Description: Fragaria vesca fve-miR11310-3p mature miRNA
• Sequence: 87 - AGGGAUCACAACUCCAGUGCU - 107
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610