miRBase entry: fve-MIR11307

Stem-loop fve-MIR11307


Accession
MI0036451
Description
Fragaria vesca fve-MIR11307 precursor miRNA


Sequence

148 reads, 15.0 reads per million, 14 experiments
augacugaauaggucggcaUUUGAGUCCAUCGCUUGUUCUguuuguuuacuccauugauuuacagcagcaaacaaauggaaUAAGCGACGGACUCCAAUCGCccaccuauuucuauagucau
((((((((((((((.((((((.((((((.(((((((((((((((((((.((...(((.....))).)).))))))))))))))))))).)))))).))).))).))))))))....))))))

Structure
      ----        c   -   U      A                   a  cca   a 
augacu    gaauaggu ggc aUU GAGUCC UCGCUUGUUCUguuuguuu cu   uug u
||||||    |||||||| ||| ||| |||||| ||||||||||||||||||| ||   ||| u
uacuga    uuuaucca cCG UAA CUCAGG AGCGAAUaagguaaacaaa ga   gac u
      uauc        c   C   C      C                   c  --c   a 


Annotation confidence High
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Genome context
LG6: 33773749-33773870 [+]

Database links

Mature fve-miR11307-5p

Accession MIMAT0060575
Description Fragaria vesca fve-miR11307-5p mature miRNA
Sequence 20 - UUUGAGUCCAUCGCUUGUUCU - 40
Evidence experimental
unknown

Mature fve-miR11307-3p

Accession MIMAT0044590
Description Fragaria vesca fve-miR11307-3p mature miRNA
Sequence 82 - UAAGCGACGGACUCCAAUCGC - 102
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610