Stem-loop fve-MIR11283

Accession

MI0036346

Description

Fragaria vesca fve-MIR11283 precursor miRNA

Sequence

26107 reads, 3101.0 reads per million, 18 experiments

agugaggAGGCUUUGUAGAGGAUGGAAUaauagagauccaucuggucacuaauguucuuuagugacuugagucguagcuuuugauuauUUCAUCCUCUGCAAAGUCUCCucacu
(((((((((((((((((((((((((((((((((((.....((.(((((((((......))))))))).)).......))))..)))))))))))))))))))))))))))))))

Structure

                               --    --aucca  u         ug 
agugaggAGGCUUUGUAGAGGAUGGAAUaau  agag       uc ggucacuaa  u
|||||||||||||||||||||||||||||||  ||||       || |||||||||   
ucacuCCUCUGAAACGUCUCCUACUUuauua  uuuc       ag ucagugauu  u
                               gu    gaugcug  u         uc 

Annotation confidence High

Genome context

LG1: 14111780-14111893 [+]

Mature fve-miR11283-5p

• Accession: MIMAT0044472
• Description: Fragaria vesca fve-miR11283-5p mature miRNA
• Sequence: 8 - AGGCUUUGUAGAGGAUGGAAU - 28
• Evidence: experimental ; Illumina [1]

Mature fve-miR11283-3p

• Accession: MIMAT0060491
• Description: Fragaria vesca fve-miR11283-3p mature miRNA
• Sequence: 89 - UUCAUCCUCUGCAAAGUCUCC - 109
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610