miRBase entry: fve-MIR11296

Stem-loop fve-MIR11296


Accession
MI0036440
Description
Fragaria vesca fve-MIR11296 precursor miRNA


Sequence

24649 reads, 2409.0 reads per million, 18 experiments
ccuaagauuuucuuugcuuucuuUUUUUGAUGGCUGGAAUCCAGUAagaacuuaaucauuuugauucauccauuCACUGGUUCCAUCCAUCAAAGaaaaaaaucaaguaaaauuuggccgg
....(((((((.((((.(((.((((((((((((.(((((.(((((((......(((((...)))))......)).)))))))))).)))))))))))).))).)))).)))))))......

Structure
--ccua       c    c   c            C     U     -  gaacuu     u 
      agauuuu uuug uuu uuUUUUUGAUGG UGGAA CCAGU Aa      aauca  
      ||||||| |||| ||| |||||||||||| ||||| ||||| ||      ||||| u
      uuuaaaa gaac aaa aaaGAAACUACC ACCUU GGUCA uu      uuagu  
ggccgg       u    u   a            U     -     C  accuac     u 


Annotation confidence Not enough data
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Genome context
LG7: 9816992-9817112 [-]

Database links

Mature fve-miR11296-5p

Accession MIMAT0044579
Description Fragaria vesca fve-miR11296-5p mature miRNA
Sequence 24 - UUUUUGAUGGCUGGAAUCCAGUA - 46
Evidence experimental
Illumina [1]

Mature fve-miR11296-3p

Accession MIMAT0060566
Description Fragaria vesca fve-miR11296-3p mature miRNA
Sequence 75 - CACUGGUUCCAUCCAUCAAAG - 95
Evidence experimental
unknown

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610