Stem-loop fve-MIR11284

Accession

MI0036347

Description

Fragaria vesca fve-MIR11284 precursor miRNA

Sequence

188974 reads, 17242.0 reads per million, 18 experiments

uccugucUUCGUGAUCUGCGAAAGGCUCcucacagucauugcccaucugauugugagacucaggcACCUGUCGUAGAUCAUGAAGAugggg
.((((((((((((((((((((.(((..(((((((((((.........)))))))))......))..))).)))))))))))))))))))).

Structure

u                    A   CU  ------         uug 
 ccugucUUCGUGAUCUGCGA AGG  Cc      ucacaguca   c
 |||||||||||||||||||| |||  ||      |||||||||   c
 ggguAGAAGUACUAGAUGCU UCC  gg      aguguuagu   c
g                    G   Ac  acucag         cua 

Annotation confidence High

Genome context

LG2: 20038989-20039079 [+]

Mature fve-miR11284-5p

• Accession: MIMAT0044473
• Description: Fragaria vesca fve-miR11284-5p mature miRNA
• Sequence: 8 - UUCGUGAUCUGCGAAAGGCUC - 28
• Evidence: experimental ; Illumina [1]

Mature fve-miR11284-3p

• Accession: MIMAT0060492
• Description: Fragaria vesca fve-miR11284-3p mature miRNA
• Sequence: 66 - ACCUGUCGUAGAUCAUGAAGA - 86
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610