Stem-loop fve-MIR390b

Accession

MI0036405

Description

Fragaria vesca fve-MIR390b precursor miRNA

Sequence

4782 reads, 492.0 reads per million, 18 experiments

aguauggaagaaucuguaAAGCUCAGGAGGGAUAGCGCCauuuaugccuugcuuggauuacuugcuuagucauauauagCGCUAUCCAUCCUGGGUUUCcuggguucuucuuacu
((((.(((((((((((..((((((((((.(((((((((.((.((((.((.((..(.....)..))..)).)))).)).))))))))).))))))))))..)))))))))))))))

Structure

    u           ua          G         C  u    c  -u  uu g 
agua ggaagaaucug  AAGCUCAGGA GGAUAGCGC au uaug cu  gc  g a
|||| |||||||||||  |||||||||| ||||||||| || |||| ||  ||  | u
ucau ucuucuugggu  UUUGGGUCCU CCUAUCGCg ua auac ga  cg  c u
    -           cC          A         a  u    u  uu  uu a 

Annotation confidence High

Genome context

LG6: 7169990-7170104 [+]

Mature fve-miR390b-5p

• Accession: MIMAT0044540
• Description: Fragaria vesca fve-miR390b-5p mature miRNA
• Sequence: 19 - AAGCUCAGGAGGGAUAGCGCC - 39
• Evidence: experimental ; Illumina [1]

Mature fve-miR390b-3p

• Accession: MIMAT0060537
• Description: Fragaria vesca fve-miR390b-3p mature miRNA
• Sequence: 80 - CGCUAUCCAUCCUGGGUUUC - 99
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610