Stem-loop fve-MIR160b

Accession

MI0036363

Description

Fragaria vesca fve-MIR160b precursor miRNA

Sequence

11192 reads, 997.0 reads per million, 18 experiments

uaugUGCCUGGCUCCCUGUAUGCCAuuugcagagagcucaucgaacaccgauggccuccguggaugGCGUAUGAGGAGCCAUGCAUAug
(((((((.(((((((.((((((((((((((.(((.((.(((((.....)))))))))).)))))))))))))).))))))).)))))))

Structure

       C       C              a   a  u     a 
uaugUGC UGGCUCC UGUAUGCCAuuugc gag gc caucg a
||||||| ||||||| |||||||||||||| ||| || ||||| c
guAUACG ACCGAGG GUAUGCGguaggug cuc cg guagc a
       U       A              c   -  -     c 

Annotation confidence High

Genome context

LG7: 14469085-14469173 [-]

Mature fve-miR160b-5p

• Accession: MIMAT0044491
• Description: Fragaria vesca fve-miR160b-5p mature miRNA
• Sequence: 5 - UGCCUGGCUCCCUGUAUGCCA - 25
• Evidence: experimental ; Illumina [1]

Mature fve-miR160b-3p

• Accession: MIMAT0060506
• Description: Fragaria vesca fve-miR160b-3p mature miRNA
• Sequence: 67 - GCGUAUGAGGAGCCAUGCAUA - 87
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610