Stem-loop fve-MIR11290

Accession

MI0036433

Description

Fragaria vesca fve-MIR11290 precursor miRNA

Sequence

5414 reads, 501.0 reads per million, 18 experiments

uccucguccucaucguggUCGUCGACAUCAAAGGGCACCcagaaaccuuauaacucgguuucaagggugcCCUUUGGUUACGACGACGAGgaugaagacgagga
((((((((.(((((.(.(((((((..((((((((((((((.((((((.........))))))..))))))))))))))..))))))).).))))).))))))))

Structure

        c     g g       AC              -a      uua 
uccucguc ucauc u gUCGUCG  AUCAAAGGGCACCc  gaaacc   u
|||||||| ||||| | |||||||  ||||||||||||||  ||||||   a
aggagcag aguag A CAGCAGC  UGGUUUCCcguggg  cuuugg   a
        a     G G       AU              aa      cuc 

Annotation confidence High

Genome context

LG7: 17981501-17981604 [-]

Mature fve-miR11290-5p

• Accession: MIMAT0044572
• Description: Fragaria vesca fve-miR11290-5p mature miRNA
• Sequence: 19 - UCGUCGACAUCAAAGGGCACC - 39
• Evidence: experimental ; Illumina [1]

Mature fve-miR11290-3p

• Accession: MIMAT0060559
• Description: Fragaria vesca fve-miR11290-3p mature miRNA
• Sequence: 71 - CCUUUGGUUACGACGACGAG - 90
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610