Accession
MI0036418
Description
Fragaria vesca
fve-MIR477a precursor miRNA
Sequence
21211
reads,
1337.0
reads per million, 18 experiments
aaggcauugguugaucACUCUCCCUCAAGGGCUUCUCgccaaggugaaguauuauauccuaggucguccccuucuuaauucuaagggagacuugggguacuuacacaagguugUGGAGCCUGCGAGGGGGAAUGAccaagcuucuugccuu
((((((..(.(((.(((.((((((((..(((((((.((((...(((((((((.....((((((((.((((..............)))))))))))))))))).)))..)).)).)))))))..)))))))).))).))).)....))))))
((((((..(.(((.(((.((((((((..(((((((.((((...(((((((((.....((((((((.((((..............)))))))))))))))))).)))..)).)).)))))))..)))))))).))).))).)....))))))
Structure
--uu g a C AA U - aag - uauau g cuucuu
aaggca g uug ucA UCUCCCUC GGGCUUC Cg cc gug aaguau ccuagguc uccc a
|||||| | ||| ||| |||||||| ||||||| || || ||| |||||| |||||||| ||||
uuccgu c aac AGU AGGGGGAG UCCGAGG gu gg cac uucaug ggguucag aggg a
ucuu g c A CG U u -aa a ----- - aaucuu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
LG5: 2676771-2676921 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fve-MIR477a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fve-miR477a-5p
| Accession | MIMAT0044556 |
| Description | Fragaria vesca fve-miR477a-5p mature miRNA |
| Sequence | 17 - ACUCUCCCUCAAGGGCUUCUC - 37 |
| Evidence |
experimental
Illumina [1] |
Mature fve-miR477a-3p
| Accession | MIMAT0060547 |
| Description | Fragaria vesca fve-miR477a-3p mature miRNA |
| Sequence | 114 - UGGAGCCUGCGAGGGGGAAUGA - 135 |
| Evidence |
experimental
unknown |
References
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