Stem-loop fve-MIR169f

Accession

MI0036385

Description

Fragaria vesca fve-MIR169f precursor miRNA

Sequence

1720 reads, 101.0 reads per million, 18 experiments

gcaugaagggguagggaauggaguUGAGCCAAGAAUGACUUGCUGcaagugaaauacguauucgucgaccgaucugagaucucgaucucgaucucggucaugaaacuaugcagCAAGUUGUUCUUGUCUCUAUUugguucucuaucuucucaugu
((((((.((((((((((((.((((.(((.(((((((((((((((((((((..........(((((.((((((..((((((....))))))...)))))))))))))).)))))))))))))))))).))).)))).)))))))))))).))))))

Structure

      a            g    U   C                  -   gaaauacgua     c      -uc      c 
gcauga gggguagggaau gagu GAG CAAGAAUGACUUGCUGca agu          uucgu gaccga   ugagau u
|||||| |||||||||||| |||| ||| |||||||||||||||||| |||          ||||| ||||||   ||||||  
uguacu uucuaucucuug uUUA CUC GUUCUUGUUGAACgacgu uca          aagua cuggcu   gcucua c
      c            g    U   U                  a   ----------     -      cua      g 

Annotation confidence Medium

Genome context

LG4: 6034885-6035039 [-]

Mature fve-miR169f-5p

• Accession: MIMAT0044517
• Description: Fragaria vesca fve-miR169f-5p mature miRNA
• Sequence: 25 - UGAGCCAAGAAUGACUUGCUG - 45
• Evidence: experimental ; Illumina [1]

Mature fve-miR169f-3p

• Accession: MIMAT0060522
• Description: Fragaria vesca fve-miR169f-3p mature miRNA
• Sequence: 114 - CAAGUUGUUCUUGUCUCUAUU - 134
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610