Stem-loop fve-MIR166f

Accession

MI0036374

Description

Fragaria vesca fve-MIR166f precursor miRNA

Sequence

3560373 reads, 248016.0 reads per million, 18 experiments

gaagcauguucuuugaggGGAAUGUUGUUUGGCACGAGGccaccaacuuuggcagaagagaaauauauaauuugauggguguauguauauauguauauguuugugcucUCGGACCAGGCUUCAUUCCCCucaauugcugcuuc
((((((.((...((((((((((((..((((((..(((((.(((.(((....(((........((((((..........)))))).......)))....))).))).)))))..))))))..))))))))))))..))))))))

Structure

      u  ucu            UU      CA     c   c   uuug   gaagagaa      aauu 
gaagca gu   uugaggGGAAUG  GUUUGG  CGAGG cac aac    gca        auauau    u
|||||| ||   ||||||||||||  ||||||  ||||| ||| |||    |||        ||||||     
cuucgu cg   aacuCCCCUUAC  CGGACC  GCUcu gug uug    ugu        uaugug    g
      -  -uu            UU      AG     c   u   uaua   -auauaug      ggua 

Annotation confidence High

Genome context

LG7: 20072839-20072981 [-]

Mature fve-miR166f-5p

• Accession: MIMAT0060514
• Description: Fragaria vesca fve-miR166f-5p mature miRNA
• Sequence: 19 - GGAAUGUUGUUUGGCACGAGG - 39
• Evidence: experimental ; unknown

Mature fve-miR166f-3p

• Accession: MIMAT0044505
• Description: Fragaria vesca fve-miR166f-3p mature miRNA
• Sequence: 109 - UCGGACCAGGCUUCAUUCCCC - 129
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610