Stem-loop fve-MIR482b

Accession

MI0036420

Description

Fragaria vesca fve-MIR482b precursor miRNA

Sequence

59581 reads, 6489.0 reads per million, 18 experiments

gauggugugacagagaagagaaaggaguuggggggaaagggaggaguggccggaaguuguggAGUGGAGUUCUGGGAAAGAAGAccaugguuuuucucgaaguaauuugggaaaaaaacauugguUCUUUCCUAGUCCUGCCAUUCCuugauuuccugucaugcauc
((((.((((((((.((((...(((((((.((.((((.((((((((....((((((.((........)).))))))........((((((.(((((((((((....)))))))))))..)).))))))))))))..)))).)))))))))..))))))))))))))))

Structure

    g        a    aga       u  g    -a        ----------------------------------------------gugg      g  gug 
gaug ugugacag gaag   aaggagu gg ggga  agggagga                                                  ccggaa uu   g
|||| |||||||| ||||   ||||||| || ||||  ||||||||                                                  |||||| ||    
cuac guacuguc cuuu   uuCCUUA CC UCCU  UCCUUUCU                                                  GGUCUU AG   A
    -        -    -ag       -  G    GA        ugguuacaaaaaaaggguuuaaugaagcucuuuuugguaccAGAAGAAAG      G  GUG 

Annotation confidence Low

Genome context

LG6: 2405273-2405439 [+]

Mature fve-miR482b-5p

• Accession: MIMAT0060549
• Description: Fragaria vesca fve-miR482b-5p mature miRNA
• Sequence: 63 - AGUGGAGUUCUGGGAAAGAAGA - 84
• Evidence: experimental ; unknown

Mature fve-miR482b-3p

• Accession: MIMAT0044558
• Description: Fragaria vesca fve-miR482b-3p mature miRNA
• Sequence: 126 - UCUUUCCUAGUCCUGCCAUUCC - 147
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610