miRBase entry: fve-MIR2111b

Stem-loop fve-MIR2111b


Accession
MI0036400
Description
Fragaria vesca fve-MIR2111b precursor miRNA


Sequence

1963 reads, 185.0 reads per million, 18 experiments
ugauauuauugcguCAGGAUCGGGUAAUCUGCAUccugagguuuagaucugcucauauguuuguuguaucuaGCCCUUGGGAUGCGGAUUACCUuguccucacuggcaaugcaauacuuguca
(((((.((((((((((((((.((((((((((((((((((((.(((((((.((..........)).).)))))).)))))))))))))))))))).))))....))))...))))))..)))))

Structure
     -u      ---    ----    C                    u      - u  ucau 
ugaua  uauugc   guCA    GGAU GGGUAAUCUGCAUccugagg uuagau c gc    a
|||||  ||||||   ||||    |||| |||||||||||||||||||| |||||| | ||     
acugu  auaacg   cggu    ccug UCCAUUAGGCGUAGGGUUCC Gaucua g ug    u
     uc      uaa    cacu    u                    C      u u  uuug 


Annotation confidence Medium
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Genome context
LG6: 5830062-5830184 [-]

Database links

Mature fve-miR2111b-5p

Accession MIMAT0044534
Description Fragaria vesca fve-miR2111b-5p mature miRNA
Sequence 15 - CAGGAUCGGGUAAUCUGCAU - 34
Evidence experimental
Illumina [1]

Mature fve-miR2111b-3p

Accession MIMAT0044535
Description Fragaria vesca fve-miR2111b-3p mature miRNA
Sequence 73 - GCCCUUGGGAUGCGGAUUACCU - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610