Stem-loop fve-MIR396d

Accession

MI0036412

Description

Fragaria vesca fve-MIR396d precursor miRNA

Sequence

gauccuccuugugauuUUCCACAGCUUUCUUGAACUGuaaagugccuuaauuaugaacuaggagauuaaccuccaugcaguuucaacagagcaagaacaguccgagaaagcugugaaaaauaacaggcaggauc
((((((.(((((.(((((.(((((((((((((.(((((....(((((.......(((((.((((......))))....)))))....)).)))...))))).))))))))))))).))))).))))).))))))

Structure

      c     g     C             A     aaag   -  uaauuau     ---a    au 
gauccu cuugu auuUU CACAGCUUUCUUG ACUGu    ugc cu       gaacu    ggag  u
|||||| ||||| ||||| ||||||||||||| |||||    ||| ||       |||||    ||||   
cuagga ggaca uaaaa gugucgaaagagc ugaca    acg ga       uuuga    ccuc  a
      c     a     a             c     -aga   a  ---caac     cgua    ca 

Annotation confidence Not enough data

Genome context

LG0: 9235892-9236025 [+]

Mature fve-miR396d

• Accession: MIMAT0044550
• Description: Fragaria vesca fve-miR396d mature miRNA
• Sequence: 17 - UUCCACAGCUUUCUUGAACUG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610