Stem-loop fve-MIR171c

Accession

MI0036390

Description

Fragaria vesca fve-MIR171c precursor miRNA

Sequence

7822 reads, 768.0 reads per million, 18 experiments

gcugcuuuaacaugagaUAUUGGUGCGGUUCAAUCAGAAaccagcucuuugcucuuaaaguucuguuauuUGAUUGAGCCGUGCCAAUAUCacauauacagc
((((..(....(((.(((((((((((((((((((((((...(((..(((((....)))))..)))...))))))))))))))))))))))).))))..))))

Structure

    cu uaac   a                       Aac   cu     c 
gcug  u    aug gaUAUUGGUGCGGUUCAAUCAGA   cag  cuuug u
||||  |    ||| |||||||||||||||||||||||   |||  |||||  
cgac  a    uac CUAUAACCGUGCCGAGUUAGUuu   guc  gaaau c
    au ----   a                       auu   uu     u 

Annotation confidence High

Genome context

LG3: 514668-514769 [-]

Mature fve-miR171c-5p

• Accession: MIMAT0044522
• Description: Fragaria vesca fve-miR171c-5p mature miRNA
• Sequence: 18 - UAUUGGUGCGGUUCAAUCAGAA - 39
• Evidence: experimental ; Illumina [1]

Mature fve-miR171c-3p

• Accession: MIMAT0044523
• Description: Fragaria vesca fve-miR171c-3p mature miRNA
• Sequence: 71 - UGAUUGAGCCGUGCCAAUAUC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610