Stem-loop ppt-MIR11318

Accession

MI0036466

Description

Physcomitrella patens ppt-MIR11318 precursor miRNA

Sequence

uguuuuuaauuuccaagacccUCCAUACCACUGCUAGAGACUacaauuuagcagguggaugccaugaauauuguagucucuagcagugauauggugggucuuggaaaauaagaaca
((((((((.((((((((((((.(((((.(((((((((((((((((((....(((((....))).))...))))))))))))))))))).))))).)))))))))))).))))))))

Structure

        a            U     C                   uuag  -   g 
uguuuuua uuuccaagaccc CCAUA CACUGCUAGAGACUacaau    ca ggu g
|||||||| |||||||||||| ||||| |||||||||||||||||||    || |||  
acaagaau aaagguucuggg gguau gugacgaucucugauguua    gu ccg a
        a            u     a                   -uaa  a   u 

Annotation confidence Not enough data

Genome context

Chr02: 13997084-13997199 [+]

Mature ppt-miR11318

• Accession: MIMAT0044605
• Description: Physcomitrella patens ppt-miR11318 mature miRNA
• Sequence: 22 - UCCAUACCACUGCUAGAGACU - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26209555
   Comprehensive Annotation of Physcomitrella patens Small RNA Loci Reveals That the Heterochromatic Short Interfering RNA Pathway Is Largely Conserved in Land Plants
   "Coruh C, Cho SH, Shahid S, Liu Q, Wierzbicki A, Axtell MJ"
   "Plant Cell (2015) 27:2148-2162