Stem-loop ppt-MIR11324

Accession

MI0036472

Description

Physcomitrella patens ppt-MIR11324 precursor miRNA

Sequence

acuucugggagagcucugcccgugucugcccgucucuggacauucaugaagcgcgcaagcgaccuugagggaaugcggacggagcuggcuaggaggaugaacauucagggacgGGCAGAAACGGGCAGAGCUCCccgagaagu
(((((((((.(((((((((((((.((((((((((((((((..(((((....(((....))).((((..((....((.......))...))..)))))))))..)))))))))))))))).)))))))))))))))).))))))

Structure

      -   a             g                ca     gaagcgcgcaagcga    ga  gaau  gg 
acuucu ggg gagcucugcccgu ucugcccgucucugga  uucau               ccuu  gg    gc  a
|||||| ||| ||||||||||||| ||||||||||||||||  |||||               ||||  ||    ||  c
ugaaga ccC CUCGAGACGGGCA AGACGGgcagggacuu  aagua               ggag  uc    cg  g
      g   -             A                ac     ---------------    ga  -ggu  ag 

Annotation confidence Not enough data

Genome context

Chr10: 14494565-14494707 [-]

Mature ppt-miR11324

• Accession: MIMAT0044611
• Description: Physcomitrella patens ppt-miR11324 mature miRNA
• Sequence: 114 - GGCAGAAACGGGCAGAGCUCC - 134
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26209555
   Comprehensive Annotation of Physcomitrella patens Small RNA Loci Reveals That the Heterochromatic Short Interfering RNA Pathway Is Largely Conserved in Land Plants
   "Coruh C, Cho SH, Shahid S, Liu Q, Wierzbicki A, Axtell MJ"
   "Plant Cell (2015) 27:2148-2162