Accession
MI0036477
Description
Physcomitrella patens
ppt-MIR11329 precursor miRNA
Sequence
278857
reads,
12079.0
reads per million, 10 experiments
uugagcacaaguucaaccUCAAAGAUCUCCGUCUGCCCUcccuugcccacacccccacccccacccacuuccccgauuugugucggggcgagcagguggCGAUCUUUGAAGCUGAACUCAuguucga
(((((((..((((((.(.(((((((((...((..((........))..))..........(((((..((((((((((....))))))).)))..))))).))))))))).).))))))..)))))))
(((((((..((((((.(.(((((((((...((..((........))..))..........(((((..((((((((((....))))))).)))..))))).))))))))).).))))))..)))))))
Structure
ca a c -----------------------------------------------UCC CU CCU
uugagca aguuca c UCAAAGAUC GU GC c
||||||| |||||| | ||||||||| || ||
agcuugu UCAAGU G AGUUUCUAG ca cg c
AC C A Cgguggacgagcggggcuguguuuagccccuucacccacccccaccccca cc uuc
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
Chr19: 12265649-12265775 [-]
Database links
Mature ppt-miR11329-5p
| Accession | MIMAT0053789 |
| Description | Physcomitrella patens ppt-miR11329-5p mature miRNA |
| Sequence | 19 - UCAAAGAUCUCCGUCUGCCCU - 39 |
| Evidence |
experimental
unknown |
Mature ppt-miR11329-3p
| Accession | MIMAT0044616 |
| Description | Physcomitrella patens ppt-miR11329-3p mature miRNA |
| Sequence | 100 - CGAUCUUUGAAGCUGAACUCA - 120 |
| Evidence |
experimental
Illumina [1] |
References
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