Accession
MI0036480
Description
Physcomitrella patens
ppt-MIR1034b precursor miRNA
Sequence
aaacaugaacaugcagagcguuucaaggcucauaacguccucauucuugcaagcacaacgcugccaaagucaugacccucuuccuuacagugacugcaaauagagauauucaUUACUUUGGCAGCGUUGUGCuugccggauugagucuuugagugauggcauacacugcauauucauguuu
(((((((((.((((((.(.((.(((..(((((.......((((.(((.((((((((((((((((((((((.((((..((((......(((...))).....))))....)))).)))))))))))))))))))))).))).))))....)))))..))).)).).)))))).)))))))))
(((((((((.((((((.(.((.(((..(((((.......((((.(((.((((((((((((((((((((((.((((..((((......(((...))).....))))....)))).)))))))))))))))))))))).))).))))....)))))..))).)).).)))))).)))))))))
Structure
c a c u ag uaacguc u u c --cc uccuua u
aaacaugaa augcag g gu uca gcuca cuca ucu gcaagcacaacgcugccaaagu auga cucu cag
||||||||| |||||| | || ||| ||||| |||| ||| |||||||||||||||||||||| |||| |||| ||| g
uuuguacuu uacguc c ua ggu ugagu gagu agg cguuCGUGUUGCGACGGUUUCA Uacu gaga guc
a a a c ag ---uucu u c U uaua -uaaac a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr17: 6852049-6852229 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppt-MIR1034b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppt-miR1034b
| Accession | MIMAT0044619 |
| Description | Physcomitrella patens ppt-miR1034b mature miRNA |
| Sequence | 113 - UUACUUUGGCAGCGUUGUGC - 132 |
| Evidence |
experimental
Illumina [1] |
References
|
