Stem-loop osa-MIR11336

Accession

MI0036487

Description

Oryza sativa osa-MIR11336 precursor miRNA

Sequence

1702 reads, 225 reads per million, 2 experiments

uacucccuccguuucacaauguaaGACUUUCUAGCGUUGCCCACAUUCauauagauguuaaugaaucuagguauauauaugugucuagauucauuagcaucuauauGAAUAUGGGAAAUGCUAGAAAGUCUuacaauaugaaacggagggagua
((((((((((((((((...(((((((((((((((((((.((((.(((((((((((((((((((((((((((((((....))))))))))))))))))))))))))))))).)))).)))))))))))))))))))...))))))))))))))))

Structure

                caa                   G    C                               u 
uacucccuccguuuca   uguaaGACUUUCUAGCGUU CCCA AUUCauauagauguuaaugaaucuagguaua a
||||||||||||||||   ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  
augagggaggcaaagu   acauUCUGAAAGAUCGUAA GGGU UAAGuauaucuacgauuacuuagaucugugu u
                aua                   A    A                               a 

Annotation confidence Low

Genome context

Chr1: 35090273-35090426 [+]

Mature osa-miR11336-5p

• Accession: MIMAT0044626
• Description: Oryza sativa osa-miR11336-5p mature miRNA
• Sequence: 25 - GACUUUCUAGCGUUGCCCACAUUC - 48
• Evidence: experimental ; Illumina [1]

Mature osa-miR11336-3p

• Accession: MIMAT0044627
• Description: Oryza sativa osa-miR11336-3p mature miRNA
• Sequence: 107 - GAAUAUGGGAAAUGCUAGAAAGUCU - 131
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26083154
   MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors
   "Baldrich P, Campo S, Wu MT, Liu TT, Hsing YI, San Segundo B"
   "RNA Biol (2015) 12:847-863