Stem-loop osa-MIR11337

Accession

MI0036488

Description

Oryza sativa osa-MIR11337 precursor miRNA

Sequence

159 reads, 109 reads per million, 2 experiments

cuuguuauuuauaaguauuaaacguagauuacugacaaaacacauuucauaaucccuaggcuauuuUGCGAGACGAAUCUAACGAGGuauauuaauccauaauuagcggaugauuacuguagcaaaucauggauuaauaUAUCUCGUUAGAUUCGUCUCGcaaaauagccuagagguuauggaauggguuuugucgguaaucuacguuuaauacuccuaaauaacaag
(((((((((((..((((((((((((((((((((((((((((.((((((((((((.(((((((((((((((((((((((((((((((((((((((((((((.(((.((..............)).))).))))))))))))))))))))))))))))))))))))))))))))).)))))))))))).))))))))))))))))))))))))))))..)))))))))))

Structure

           ua                            a            c                                             a   a  ggauga 
cuuguuauuua  aguauuaaacguagauuacugacaaaac cauuucauaauc cuaggcuauuuUGCGAGACGAAUCUAACGAGGuauauuaauccau auu gc      u
|||||||||||  |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||       
gaacaauaaau  ucauaauuugcaucuaauggcuguuuug guaagguauugg gauccgauaaaacGCUCUGCUUAGAUUGCUCUAUauaauuaggua uaa cg      u
           cc                            g            a                                             c   a  auguca 

Annotation confidence Low

Genome context

Chr2: 27593780-27594007 [+]

Mature osa-miR11337-5p

• Accession: MIMAT0044628
• Description: Oryza sativa osa-miR11337-5p mature miRNA
• Sequence: 67 - UGCGAGACGAAUCUAACGAGG - 87
• Evidence: experimental ; Illumina [1]

Mature osa-miR11337-3p

• Accession: MIMAT0044629
• Description: Oryza sativa osa-miR11337-3p mature miRNA
• Sequence: 140 - UAUCUCGUUAGAUUCGUCUCG - 160
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26083154
   MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors
   "Baldrich P, Campo S, Wu MT, Liu TT, Hsing YI, San Segundo B"
   "RNA Biol (2015) 12:847-863