Stem-loop osa-MIR11343

Accession

MI0036494

Description

Oryza sativa osa-MIR11343 precursor miRNA

Sequence

443 reads, 307 reads per million, 2 experiments

ucuccguuucauacuauagaCUUUCUAGCGUUGCCCACAUUcauauauguguuaaugaaucuagauauauaugugugccuagaugaaucuauaUGAAUGUGGGCAAUGUUAAAAagucuuauaaucugaaauagagg
.(((.((((((...((((((((((.((((((((((((((((((((((.((........((((((.((((....)))).))))))..)).)))))))))))))))))))))).)))))).))))...)))))).))).

Structure

u   c      uac    -      C                      u  guuaauga      a    u 
 cuc guuuca   uaua gaCUUU UAGCGUUGCCCACAUUcauaua gu        aucuag uaua a
 ||| ||||||   |||| |||||| |||||||||||||||||||||| ||        |||||| ||||  
 gag uaaagu   auau cugaAA AUUGUAACGGGUGUAAGUauau ua        uagauc gugu u
g   a      cua    u      A                      c  ------ag      c    g 

Annotation confidence Low

Genome context

Chr12: 16169048-16169184 [-]

Mature osa-miR11343-5p

• Accession: MIMAT0044640
• Description: Oryza sativa osa-miR11343-5p mature miRNA
• Sequence: 21 - CUUUCUAGCGUUGCCCACAUU - 41
• Evidence: experimental ; Illumina [1]

Mature osa-miR11343-3p

• Accession: MIMAT0044641
• Description: Oryza sativa osa-miR11343-3p mature miRNA
• Sequence: 94 - UGAAUGUGGGCAAUGUUAAAA - 114
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26083154
   MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors
   "Baldrich P, Campo S, Wu MT, Liu TT, Hsing YI, San Segundo B"
   "RNA Biol (2015) 12:847-863