Stem-loop osa-MIR6245b

Accession

MI0036498

Description

Oryza sativa osa-MIR6245b precursor miRNA

Sequence

40 reads, 41 reads per million, 2 experiments

auaggugucgguuuUUUAAUAGAACCGACACCUAUacuuauauacuuauauuauaggugucgguucuagagaaaaaaccggcaccuauauauaugugccgguuuuuucuguggaaccaauaccuauaauauaaGUAUAGGUGUCGGUUCUAUUAaaaaccgauaccuau
((((((((((((((((.((((((((((((((((((((((((((........(((((((((.(((((((.(((((((((((((((.((....)).))))))))))))))).))))))).)))))))))))))))))))))))))))))))))))))))))))))))))))

Structure

                U                          acuuauau         c       g               c  u 
auaggugucgguuuUU AAUAGAACCGACACCUAUacuuauau        uauaggugu gguucua agaaaaaaccggcac ua a
|||||||||||||||| ||||||||||||||||||||||||||        ||||||||| ||||||| ||||||||||||||| ||  
uauccauagccaaaaA UUAUCUUGGCUGUGGAUAUGaauaua        auauccaua ccaaggu ucuuuuuuggccgug au u
                -                          --------         a       g               u  a 

Annotation confidence Not enough data

Genome context

Chr12: 12892462-12892630 [-]

Mature osa-miR6245b-5p

• Accession: MIMAT0044648
• Description: Oryza sativa osa-miR6245b-5p mature miRNA
• Sequence: 15 - UUUAAUAGAACCGACACCUAU - 35
• Evidence: experimental ; Illumina [1]

Mature osa-miR6245b-3p

• Accession: MIMAT0044649
• Description: Oryza sativa osa-miR6245b-3p mature miRNA
• Sequence: 134 - GUAUAGGUGUCGGUUCUAUUA - 154
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26083154
   MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors
   "Baldrich P, Campo S, Wu MT, Liu TT, Hsing YI, San Segundo B"
   "RNA Biol (2015) 12:847-863