Stem-loop ssc-mir-33b

Accession

MI0036557

Description

Sus scrofa ssc-mir-33b precursor miRNA

Literature search

8 open access papers mention ssc-mir-33b
(16 sentences)

Sequence

15298 reads, 11.0 reads per million, 165 experiments

cgggcggccccgcgGUGCAUUGCUGUUGCAUUGCAcgugugaggcgggugCAGUGCCUCGGCAGUGCAGCCcggagccggccccuggcaccga
.(((((((.(((.((((((((((((..(((((((((.(((...))).)))))))))..)))))))))).))))).))).))))..........

Structure

---------c    -   c   c  -          UU         g   g 
          gggc ggc ccg gG UGCAUUGCUG  GCAUUGCAc ugu  
          |||| ||| ||| || ||||||||||  ||||||||| ||| a
          cccg ccg ggc CC ACGUGACGGC  CGUGACgug gcg  
agccacgguc    g   a   -  G          UC         g   g 

Annotation confidence High

Genome context

Unknown

Mature ssc-miR-33b-5p

• Accession: MIMAT0044654
• Description: Sus scrofa ssc-miR-33b-5p mature miRNA
• Sequence: 15 - GUGCAUUGCUGUUGCAUUGCA - 35
• Evidence: not_experimental

Mature ssc-miR-33b-3p

• Accession: MIMAT0044655
• Description: Sus scrofa ssc-miR-33b-3p mature miRNA
• Sequence: 51 - CAGUGCCUCGGCAGUGCAGCC - 71
• Evidence: not_experimental

References

1. PubMed ID: 24398549
   MicroRNA-33b downregulates the differentiation and development of porcine preadipocytes
   "Taniguchi M, Nakajima I, Chikuni K, Kojima M, Awata T, Mikawa S"
   "Mol Biol Rep (2014) 41:1081-1090