miRBase entry: fhe-mir-61

Stem-loop fhe-mir-61


Accession
MI0037102
Description
Fasciola hepatica fhe-mir-61 precursor miRNA


Sequence

ugugagucucuuucuuguccaugguaccaguucgauugagaacgaucugugcgucguguuucgugucacaccacaguucaucucauacguaacuccauacugccugagccagccAUGACUAGAAAGUGCACUCACUUc
.(((((((.((((((.(((.(((((...((((((..(((((..((.(((((.((.(((........)))))))))).)).)))))..)).)))).......((....))..)))))))).)))))).).))))))...

Structure
--u      - u      u   c     --------------acc    -  au     ac  u     c  c   uuu 
   gugagu c cuuucu guc auggu                 aguu cg  ugaga  ga cugug gu gug   c
   |||||| | |||||| ||| |||||                 |||| ||  |||||  || ||||| || |||    
   CACUCA G GAAAGA CAG UAccg                 ucaa gc  acucu  cu gacac ca cac   g
cUU      C U      U   -     accgaguccgucauacc    u  au     -a  u     -  -   ugu 


Annotation confidence Not enough data
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Genome context
scaffold1123: 381790-381927 [+]

Database links

Mature fhe-miR-61

Accession MIMAT0045200
Description Fasciola hepatica fhe-miR-61 mature miRNA
Sequence 115 - AUGACUAGAAAGUGCACUCACUU - 137
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26432296
    The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
    "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
    "Int J Parasitol (2015) 45:901-913