Stem-loop fhe-mir-219

Accession

MI0037104

Description

Fasciola hepatica fhe-mir-219 precursor miRNA

Sequence

UGAUUGUCCAUUCGCAUUUCUUGccguccguuucaagccugucucgauccaccgaguacacaaauggcuuaaaacgcguacaauaagugcaagagauguuuaugggcauc
....(((((((..((((((((((((((((((((.((((((((((((......)))).))).....))))).))))).).)).....).)))))))))))..)))))))..

Structure

UGAU       UC           - -----  - -     c     -----   -    au 
    UGUCCAU  GCAUUUCUUGc c     gu c cguuu aagcc     ugu cucg  c
    |||||||  ||||||||||| |     || | ||||| |||||     ||| ||||   
    acgggua  uguagagaacg g     ca g gcaaa uucgg     aca gagc  c
--cu       uu           u aauaa  u c     a     uaaac   u    ca 

Annotation confidence Not enough data

Genome context

scaffold2927: 32632-32741 [+]

Mature fhe-miR-219

• Accession: MIMAT0045202
• Description: Fasciola hepatica fhe-miR-219 mature miRNA
• Sequence: 1 - UGAUUGUCCAUUCGCAUUUCUUG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26432296
   The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
   "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
   "Int J Parasitol (2015) 45:901-913