Stem-loop fhe-mir-2a

Accession

MI0037107

Description

Fasciola hepatica fhe-mir-2a precursor miRNA

Literature search

1 open access papers mention fhe-mir-2a
(1 sentences)

Sequence

cagucaauacuggcuggaggcaccguaagucuGUCACAGCCAGAAUUGAUGAACG
..((((((.(((((((..((((.........)))).))))))).)))))).....

Structure

---ca      a       ga    ccg 
     gucaau cuggcug  ggca   u
     |||||| |||||||  ||||   a
     UAGUUA GACCGAC  CUGu   a
GCAAG      A       -A    cug 

Annotation confidence Not enough data

Genome context

scaffold879: 28178-28232 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from fhe-mir-2a

Mature fhe-miR-2a

• Accession: MIMAT0045205
• Description: Fasciola hepatica fhe-miR-2a mature miRNA
• Sequence: 33 - GUCACAGCCAGAAUUGAUGAACG - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26432296
   The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
   "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
   "Int J Parasitol (2015) 45:901-913