miRBase entry: fhe-mir-2b

Stem-loop fhe-mir-2b


Accession
MI0037108
Description
Fasciola hepatica fhe-mir-2b precursor miRNA

Literature search
1 open access papers mention fhe-mir-2b
(2 sentences)

Sequence

ccucggggguugugacacauggcgccauuGUAUCACAGCCCUGCUUGGGACA
(((..((((((((((.(((((....)).))).))))))))))....)))...

Structure
---   --cg          c   -  g 
   ccu    gggguuguga aca ug c
   |||    |||||||||| ||| ||  
   GGG    UCCCGACACU UGu ac g
ACA   UUCG          A   u  c 


Annotation confidence Not enough data
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Genome context
scaffold879: 28276-28327 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from fhe-mir-2b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature fhe-miR-2b

Accession MIMAT0045206
Description Fasciola hepatica fhe-miR-2b mature miRNA
Sequence 30 - GUAUCACAGCCCUGCUUGGGACA - 52
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26432296
    The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
    "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
    "Int J Parasitol (2015) 45:901-913