Stem-loop fhe-mir-2d

Accession

MI0037110

Description

Fasciola hepatica fhe-mir-2d precursor miRNA

Literature search

1 open access papers mention fhe-mir-2d
(1 sentences)

Sequence

aucaguagauugugauacccugccagcgugguucgaaggcguguggcucuugaagaauuucugcggcaccgccaaguaGUAUCACAGUCCUGCUUAGGUG
...(((((((((((((((...((((...)))).....(((((((.((...............)).))).)))).....)))))))))).)))))......

Structure

---auc     -          ccugccagcgugguucgaa    -   g  ucuuga 
      aguag auugugauac                   ggcg ugu gc      a
      ||||| ||||||||||                   |||| ||| ||      g
      UCGUC UGACACUAUG                   ccgc acg cg      a
GUGGAU     C          --------------augaa    c   g  ucuuua 

Annotation confidence Not enough data

Genome context

scaffold278: 636316-636415 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from fhe-mir-2d

Mature fhe-miR-2d

• Accession: MIMAT0045208
• Description: Fasciola hepatica fhe-miR-2d mature miRNA
• Sequence: 79 - GUAUCACAGUCCUGCUUAGGUG - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26432296
   The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
   "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
   "Int J Parasitol (2015) 45:901-913