Stem-loop fhe-mir-9

Accession

MI0037114

Description

Fasciola hepatica fhe-mir-9 precursor miRNA

Sequence

UCUUUGGUUAUCAAGCAGUAUGauugucacacuugaaacggccagugacacaacaacacgcgcacuugugcucgcgugauuguuucugugucgaugacacucggcucgucuaacaucauaaagcuaggugaccaaagu
.(((((((((((.(((..((((((.((..........(((((((((((((((((((((((((..(....)..)))))).))))...))))))......))).))).)))...))))))))..))).))))))))))).

Structure

U           A   AG      u  cacacuugaa   -   -   ------      ---    -      ca u 
 CUUUGGUUAUC AGC  UAUGau gu          acg gcc agu      gacaca   acaa cacgcg  c u
 ||||||||||| |||  |||||| ||          ||| ||| |||      ||||||   |||| ||||||  |  
 gaaaccagugg ucg  auacua ca          ugc cgg uca      cugugu   uguu gugcgc  g g
u           a   aa      -  -------auc   u   c   caguag      cuu    a      uc u 

Annotation confidence Not enough data

Genome context

scaffold943: 103465-103602 [+]

Mature fhe-miR-9

• Accession: MIMAT0045212
• Description: Fasciola hepatica fhe-miR-9 mature miRNA
• Sequence: 1 - UCUUUGGUUAUCAAGCAGUAUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26432296
   The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
   "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
   "Int J Parasitol (2015) 45:901-913