Stem-loop fhe-mir-71b

Accession

MI0037121

Description

Fasciola hepatica fhe-mir-71b precursor miRNA

Literature search

2 open access papers mention fhe-mir-71b
(4 sentences)

Sequence

UGAAAGACUUGAGUAGUGAGacgcaugccgguuaccgucauguggucaagccauacuucggucccggcgccucauacccagucuuucgug
.((((((((.(.(((.((((..((..(((((..((((...((((((...))))))...)))).))))))))))))))).))))))))...

Structure

--U        U A   G    ac  au     uu    uca      c 
   GAAAGACU G GUA UGAG  gc  gccgg  accg   uguggu  
   |||||||| | ||| ||||  ||  |||||  ||||   |||||| a
   cuuucuga c cau acuc  cg  cggcc  uggc   auaccg  
gug        c -   -    --  --     -c    uuc      a 

Annotation confidence Not enough data

Genome context

scaffold278: 635977-636066 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from fhe-mir-71b

Mature fhe-miR-71b

• Accession: MIMAT0045219
• Description: Fasciola hepatica fhe-miR-71b mature miRNA
• Sequence: 1 - UGAAAGACUUGAGUAGUGAG - 20
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26432296
   The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
   "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
   "Int J Parasitol (2015) 45:901-913