Stem-loop apl-mir-11590

Accession

MI0037140

Description

Anas platyrhynchos apl-mir-11590 precursor miRNA

Sequence

UUCCAGUCCAUGUACCAUCAGUguguauuuauccaaggacuGCUGGAUGCAAGGACUGGAUCC
.((((((((.(((((((.((((.(............).)))).))).)))).))))))))...

Structure

--U        A    -   U    g guauu 
   UCCAGUCC UGUA CCA CAGU u     u
   |||||||| |||| ||| |||| |      
   AGGUCAGG ACGU GGU Guca g     a
CCU        A    A   C    g aaccu 

Annotation confidence Not enough data

Genome context

scaffold1656: 110937-110999 [+]

Mature apl-miR-11590-5p

• Accession: MIMAT0045240
• Description: Anas platyrhynchos apl-miR-11590-5p mature miRNA
• Sequence: 1 - UUCCAGUCCAUGUACCAUCAGU - 22
• Evidence: experimental ; Illumina [1]

Mature apl-miR-11590-3p

• Accession: MIMAT0045241
• Description: Anas platyrhynchos apl-miR-11590-3p mature miRNA
• Sequence: 42 - GCUGGAUGCAAGGACUGGAUCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26369256
   Identification and profiling of microRNAs associated with white and black plumage pigmentation in the white and black feather bulbs of ducks by RNA sequencing
   "Apopo S, Liu H, Jing L, Du X, Xie S, Gong Y, Xu R, Li S"
   "Anim Genet (2015) 46:627-635