Stem-loop apl-mir-11591

Accession

MI0037141

Description

Anas platyrhynchos apl-mir-11591 precursor miRNA

Sequence

GGCUGUGCUGUAAGUGUUCCCUguuuuaaauaccaggGAACCCUUGCAGAAGAGCUG
((((.(.(((((((.((((((((..........)))))))).))))))).).)))).

Structure

-    G G       U        uuuu 
 GGCU U CUGUAAG GUUCCCUg    a
 |||| | ||||||| ||||||||     
 UCGA A GACGUUC CAAGggac    a
G    G A       C        caua 

Annotation confidence Low

Genome context

scaffold927: 340172-340228 [+]

Mature apl-miR-11591-5p

• Accession: MIMAT0045242
• Description: Anas platyrhynchos apl-miR-11591-5p mature miRNA
• Sequence: 1 - GGCUGUGCUGUAAGUGUUCCCU - 22
• Evidence: experimental ; Illumina [1]

Mature apl-miR-11591-3p

• Accession: MIMAT0045243
• Description: Anas platyrhynchos apl-miR-11591-3p mature miRNA
• Sequence: 38 - GAACCCUUGCAGAAGAGCUG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26369256
   Identification and profiling of microRNAs associated with white and black plumage pigmentation in the white and black feather bulbs of ducks by RNA sequencing
   "Apopo S, Liu H, Jing L, Du X, Xie S, Gong Y, Xu R, Li S"
   "Anim Genet (2015) 46:627-635